Analysis of FFPE tumor samples

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  • Published on:  1/19/2015
  • Formalin Fixed, Paraffin-Embedded (FFPE) samples are challenging to work with. Dr. Nicole Pfarr discusses her experience with Ion AmpliSeq™ Panels (they currently use eight routinely, both standard and custom ones) on the Ion PGM™ System http://www.lifetechnologies.com/us/en/home/life-science/sequencing/next-generation-sequencing/ion-torrent-next-generation-sequencing-workflow/ion-torrent-next-generation-sequencing-run-sequence/ion-pgm-system-for-next-generation-sequencing.html?socid=social_btb. She discusses her DNA failure rate, recurring artifacts, as well as her use of Ion Reporter™ Software http://www.lifetechnologies.com/us/en/home/life-science/sequencing/next-generation-sequencing/ion-torrent-next-generation-sequencing-workflow/ion-torrent-next-generation-sequencing-data-analysis-workflow/ion-reporter-software.html?socid=social_btb in the video interview.
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